For reporting bugs please go to the JIRA Issue Tracker, to ask a question visit the Forum.
1 - Introduction
2 - Download
- 1.0.1 Release Notes
- 1.0.2 Release Notes
- 1.1 Release Notes
- 1.2 Release Notes
- 1.2.1 Release Notes
- 1.2.2 Release Notes
- 1.2.3 Release Notes
- 1.2.4 Release Notes
- 1.3 Release Notes
- 1.4 Release Notes
- 1.5.1 Release Notes
- 1.5.2 Release Notes
- 1.6 Release Notes
- 1.6.1 Release Notes
3 - Getting Started
4 - Annotation Mapping
5 - Deconvolution
6 - Quantified Elements
Appendix A - File Format Specifications
Appendix B - Frequently Asked Questions (FAQ)
Appendix C - JIRA Issue Tracker
Appendix D - Forum
- D.1 - FAQ (Frequently Asked Questions)
- Analysis of Geuvadis Dataset using Flux-Capacitor.
- Cant find tool capacitor
- Flux Capacitor output files
- Flux Capcacitor error: java.lang.OutOfMemoryError: Java heap space with FLUX_MEM=16G
- How to get name and sequence of reads mapped to a particular gene
- How to quantify multiple bam files
- How to quantify the expression value of transcript in RPKM
- Overlapping transcripts - RPKM NAN
- Problems working with BAM files
- Understanding RPKM values
- You cannot specify a READ_Descriptor for BAM files
- D.2 - Annotation Mapping
- D.3 - Bias Estimation
- D.4 - Deconvolution
